Method for Purification of Human Hematopoietic Stem Cells by Flow Cytometry

Human hematopoietic stem cells (HSCs) and progenitors can be isolated by enriching for a rare cell population with a combination of monoclonal antibodies (MAbs). Such an isolation scheme involves multi-step procedures including ficoll-density fractionation and presort enrichment followed by cell sorting. Over the past decade, various cell-surface and metabolic markers have been identified and used to isolate human HSCs and progenitors as summarized in Table 1. Among them, CD34 has become the most critical cell-surface marker for positively selecting a rare cell population (1,2). Within the CD34+ cell population, the differential expression of Thy-1, CD38, and AC133 have been used to fractionate HSCs and progenitors. In order to subfractionate CD34+ cells by these markers, the cells can be further purified by flow cytometry. HSCs can be further enriched into a Thy-1+ (3–7), CD38-lo (8–10), Thy-1+ CD38-lo (11), or AC133+ (12,13) fraction of CD34+ cells.

Table 1

Commercially Available Cell-Surface and Metabolic Markers for Isolation of Human HSC and Progenitor Cells

Marker

Expression/Remark

Fluorochrome conjugate recommended

Reference

Positive marker

CD34

Positive

FITC, PE, APC, BIO

1,2,33

Thy-1

Positive

PE, BIO

3,4

AC133

Positive

PE

12,34

Negative/low marker

CD38

Negative /low

FITC, PE, APC

8,9

HLA-DRa

Negative to low

FITC, PE

35,36

Mature lineage marker, Lin-

CD2

T-cell lineage

FITC, PE, BIO

3

CD3

T-cell lineage

FITC, PE, APC, BIO

3

CD19

B-cell lineage

FITC, PE, APC, BIO

3

CD16

NK-cell lineage

FITC, PE, APC, BIO

3

CD14

Myeloid lineage

FITC, PE

3

CD15

Myeloid lineage

FITC, PE

3

Glycophorin A

Erythroid lineage

FITC, PE

3

2nd Step reagent

Avidin/Streptavidin

For BIO MAb

FITC, PE, APC, TXRD, PharRed, Cy-chromed

Metabolic markerb

Rhodamine 123c

Low

Mitochondria-binding dye

37,38

Hoechst 33342c

Low

DNA-binding dye

39,40

Pyronin Y

Low

RNA-binding dye

39,40

Propidium iodide

Negative to low

Dead-cell exclusion

Abbreviations: FBM, fetal bone marrow; MPB, mobilized peripheral blood; ABM, adult bone marrow; HSC, hematopoietic stem cells; FITC, fluorescein; PE, phycoerythrin; APC, allophycocyanin; TXRD, Texas red; BIO, biotinylated.aFBM, MPB HSCs express HLA-DR(41,42).bTo isolate quiescent HSC.cSubstrates for p-glycoprotein, encoded by MDR-1. HSC possess high levels of p-glycoprotein efflux activity.dRecommended for single laser flow cytometry only, lineage marker positive and PI positive cells can be excluded simultaneously.

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